Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9323471 chr14:66814570 T/C ATP6V1D chr14:67761088-67826982:- 0.43 7.5 3.07E-13 Box Plot
THCA rs9324721 chr5:151665189 C/T FILIP1L chr3:99548985-99833357:- -0.21 -5.89 7.45E-9 Box Plot
THCA rs932626 chr6:26839716 T/G ZNF322B chr9:99957633-99961910:- 0.36 6.28 7.84E-10 Box Plot
THCA rs9329221 chr8:10240202 G/T SGK223 chr8:8175258-8244008:- -0.35 -6.97 1.05E-11 Box Plot
THCA rs9329223 chr8:10331754 C/T SGK223 chr8:8175258-8244008:- 0.34 6.44 2.89E-10 Box Plot
THCA rs9329232 chr8:10863154 C/T SGK223 chr8:8175258-8244008:- 0.39 7.11 4.14E-12 Box Plot
THCA rs9329234 chr8:10864696 T/C SGK223 chr8:8175258-8244008:- 0.37 6.81 2.91E-11 Box Plot
THCA rs9329238 chr8:11033737 C/T SGK223 chr8:8175258-8244008:- 0.44 8.05 6.4E-15 Box Plot
THCA rs9329251 chr8:11793606 G/A SGK223 chr8:8175258-8244008:- -0.46 -8.54 1.75E-16 Box Plot
THCA rs9332387 chr14:39913826 T/A LOC647288 chr13:75811890-75814517:- 0.49 9.13 2.0E-18 Box Plot
THCA rs9348709 chr6:26360311 G/A RNF5P1 chr8:38458179-38458718:- 0.58 6.28 7.82E-10 Box Plot
THCA rs9348712 chr6:26366511 T/A RNF5P1 chr8:38458179-38458718:- 0.58 6.29 7.27E-10 Box Plot
THCA rs9348716 chr6:26375658 G/A RNF5P1 chr8:38458179-38458718:- 0.58 6.18 1.36E-9 Box Plot
THCA rs9348716 chr6:26375658 G/A ZFP57 chr6:29640169-29648887:- 0.53 5.9 6.78E-9 Box Plot
THCA rs9348721 chr6:26485573 A/G RNF5P1 chr8:38458179-38458718:- 0.55 5.97 4.66E-9 Box Plot